Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs73434535 chr6:42957964 C/A 0 489 30.75 31.93 20.25 KM Plot
PRAD rs73589385 chr8:54158807 C/T 2.73E-6 493 31.27 26.93 49.93 KM Plot
PRAD rs73602836 chr8:54165990 G/A 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602840 chr8:54166629 G/A 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602841 chr8:54166809 G/A 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602843 chr8:54169845 T/C 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602844 chr8:54171059 T/C 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602846 chr8:54173941 T/C 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602847 chr8:54174788 C/T 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602848 chr8:54174874 T/C 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602849 chr8:54175095 T/A 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602852 chr8:54177381 A/C 2.73E-6 492 31.32 26.93 49.93 KM Plot
PRAD rs73602860 chr8:54185134 T/C 3.0E-6 492 31.27 26.93 49.93 KM Plot
PRAD rs7363897 chr20:2058955 A/C 3.96E-7 487 28.87 33.6 29.55 KM Plot
PRAD rs73806917 chr5:154264591 T/C 0 494 30.08 33.47 4.87 KM Plot